The detailed information of tRNA gene sequence


Sequence ID>ENV09001222
Genome IDABSQ01052576
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 675
End posion on genome 748
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcacataaaa
tRNA gene sequence 
GGCGCGATAGCAAAGCGGTTATGCCGCGGCCTGCAAAGCCGTTTAGACCAGTTCGACTCT
GGTTCGCGCCTCCA
Downstream region at tRNA end position 
aaaatctcat
Secondary structure (Cloverleaf model)
>ENV09001222	Cys	GCA
                   a      TCCA aaaatctcat
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T C
                    T     T G G T C     A
        G A        A      | | | | |     G
      C     A A C G       A C C A G     C
      G       | | |                 T T
      G     A T G C
        T T        C     TTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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