The detailed information of tRNA gene sequence


Sequence ID>ENV09001229
Genome IDABSQ01054117
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 490
End posion on genome 562
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tagacgtttc
tRNA gene sequence 
GGGGCGGTAGCTCAGTTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCACCGGTTCGATC
CCGGTCCGCTCCAtta
Downstream region at tRNA end position 
tggcaggtca
Secondary structure (Cloverleaf model)
>ENV09001229	Ala	TGC
                   c      Atta tggcaggtca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C          C T
                    T     T G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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