The detailed information of tRNA gene sequence


Sequence ID>ENV09001233
Genome IDABSQ01054422
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 132
End posion on genome 40
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attgtgacgt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCCGAAGGCAGCGGTTTGCTAAACCGCCGTAGGGACAAAATCT
CTACCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
cacgctcaac
Secondary structure (Cloverleaf model)
>ENV09001233	Ser	GCT
                   t      GCCA cacgctcaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        A     CGTAGGGACAAAATCTCTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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