The detailed information of tRNA gene sequence


Sequence ID>ENV09001240
Genome IDABSQ01055151
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 728
End posion on genome 635
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggaacacac
tRNA gene sequence 
GGAGAGATGCCCGAGTGGTCGAAGGGGCTCGCCTGCTAAGCGAGTGTAGGGGCTTAAACC
CTTACCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gcgatgcctg
Secondary structure (Cloverleaf model)
>ENV09001240	Ser	GCT
                   c      GCCA gcgatgcctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C C       G A G G G     C
    G         | | |                 T T
    T       A G G G
      C G A        G     TGTAGGGGCTTAAACCCTTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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