The detailed information of tRNA gene sequence


Sequence ID>W2030038721
Genome IDSCKJ01000005
Search identical group
Phylum/ClassFidelibacterota
SpeciesCandidatus Marinimicrobia bacterium TS1B10-1 [SCKJ]
Start position on genome 183169
End posion on genome 183262
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gccggatatt
tRNA gene sequence 
GGAAGCGTTTGTAGCTCCGGTGGGCGCCACAGTCTTCAAAACTGCTGATCTGCCGTAAGG
TGGATGGTCGGTTCGACTCCGACACGTTTCCGCAg
Downstream region at tRNA end position 
atgagagtag
Secondary structure (Cloverleaf model)
>W2030038721	SeC	TCA
                   t      GCAg atgagagtag
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C
                     T - A          T C
                    T     C A G C C     A
      C T C        T      | | | | |     G
    C       G A T G       G T C G G     C
    G           + |                 T T
    G       G C G C
      T G G        C     TGATCTGCCGTAAGGTGGATG
                    A   C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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