The detailed information of tRNA gene sequence


Sequence ID>ENV09001246
Genome IDABSQ01055500
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 808
End posion on genome 880
Amino Acid Pseudo
Anticodon CCG
Upstream region at tRNA start position 
tggttgattt
tRNA gene sequence 
GGCCCGTGGGTGTGCCGGAGCGCATGTCAGCTTCCGAAGCTGTTGGACCAGGTTCGATTC
CTGGACGGGCTACtg
Downstream region at tRNA end position 
agagaaagtc
Secondary structure (Cloverleaf model)
>ENV09001246	Pseudo	CCG
                   t      ACtg agagaaagtc
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    G     G G T C C     A
      C C G        G      | | | | |     G
    G       T G T G       C C A G G     C
    G       + | | +                 T T
    A       G C A T
      G C          G     TGGA
                    T   T
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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