The detailed information of tRNA gene sequence


Sequence ID>ENV09001255
Genome IDABSQ01057136
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 264
End posion on genome 354
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccacgaccgc
tRNA gene sequence 
GGAGAGGTAGCGAAGTGGTCATAACGCGCCCGCCTCGAAAGCGGGTTGGGGGGTAACCTC
CACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
acttcctcgc
Secondary structure (Cloverleaf model)
>ENV09001255	Ser	CGA
                   c      GCCA acttcctcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C G       G T G G G     C
  T           | | |                 T T
  C         A C G C
    A T A          G     TTGGGGGGTAACCTCCAC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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