The detailed information of tRNA gene sequence


Sequence ID>ENV09001298
Genome IDABSR01000718
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethylamine_C1
Species
Start position on genome 648
End posion on genome 559
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttttagact
tRNA gene sequence 
GGAAGAGTGGCAGAGCGGTTTAATGCTACAGTCTTGAAAACTGTCGTGGGTTCACGCCCA
CCGTGAGTTCGAATCTCACCTCTTCCGCCA
Downstream region at tRNA end position 
aatttaaatg
Secondary structure (Cloverleaf model)
>ENV09001298	Ser	TGA
                   t      GCCA aatttaaatg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T T A        T     CGTGGGTTCACGCCCACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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