The detailed information of tRNA gene sequence


Sequence ID>W2030049836
Genome IDVHSP01000002
Search identical group
Phylum/ClassGammaproteobacteria
Species1-1(7) [VHSP]
Start position on genome 798543
End posion on genome 798452
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
caccattgtG
tRNA gene sequence 
GAATGAGATGGGGTCTGGTGGCCCTCTTGGTCTTCAAAACCAAAGTGAGCCGCACAGGCT
TTGGTAGGTTCGATTCCTGCCTCTTCCGCCA
Downstream region at tRNA end position 
attatgtcac
Secondary structure (Cloverleaf model)
>W2030049836	SeC	TCA
                   G      GCCA attatgtcac
                     G - C
                     A   C
                     A - T
                     T   T
                     G - C
                     A - T
                     G - C          T T
                    A     C G T C C     A
      T C T        T      | + | | |     G
    G       G G G G       G T A G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     AGTGAGCCGCACAGGCTTTG
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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