The detailed information of tRNA gene sequence


Sequence ID>ENV09001417
Genome IDABSR01006030
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethylamine_C1
Species
Start position on genome 325
End posion on genome 414
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccccctaac
tRNA gene sequence 
GGAAGAGTGGATGAGCGGTTTAAGTCACCACCCTGGAAAGGTGGCATAGGGGTAACCCTA
TCGAGAGTTCGAATCTCTCCTCTTCCGCCA
Downstream region at tRNA end position 
gcgcttattt
Secondary structure (Cloverleaf model)
>ENV09001417	Ser	GGA
                   c      GCCA gcgcttattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G T A G       G A G A G     C
    G         + | |                 T T
    T       A G T C
      T T A        A     CATAGGGGTAACCCTATC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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