The detailed information of tRNA gene sequence


Sequence ID>ENV09001446
Genome IDABSR01009937
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethylamine_C1
Species
Start position on genome 429
End posion on genome 341
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acgggcgcgc
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGTTGAATCGGGCGGTCTCGAAAACCGTTGTACTCAAAAGGTAC
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gatccggcac
Secondary structure (Cloverleaf model)
>ENV09001446	Ser	CGA
                   c      GCCA gatccggcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGTACTCAAAAGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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