The detailed information of tRNA gene sequence


Sequence ID>ENV09001523
Genome IDABSR01024206
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethylamine_C1
Species
Start position on genome 329
End posion on genome 239
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agctttgttt
tRNA gene sequence 
GGAGGGGTGGCTGAGTGGCCGAAAGCGGCGGCCTTGAAAGCCGTTGAAGGACTAGTGCCT
TCCGTGGGTTCGAATCCTACCCCCTCCGCCA
Downstream region at tRNA end position 
aatccaccct
Secondary structure (Cloverleaf model)
>ENV09001523	Ser	TGA
                   t      GCCA aatccaccct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TGAAGGACTAGTGCCTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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