The detailed information of tRNA gene sequence


Sequence ID>ENV09001531
Genome IDABSR01024742
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethylamine_C1
Species
Start position on genome 19
End posion on genome 112
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctgacaacc
tRNA gene sequence 
GGAGAGGTGGCCGAGCCTGGTTTAAGGCGCAGCACTGGAAATGCTGTGAACTCCTAACGG
GGTTCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttgccaata
Secondary structure (Cloverleaf model)
>ENV09001531	Ser	GGA
                   c      GCCA tttgccaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  T         G C C G       G G G G G     C
  G           | | |                 T T
  G         A G G C
    T T T A        G     TGAACTCCTAACGGGGTTCC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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