The detailed information of tRNA gene sequence


Sequence ID>ENV09001533
Genome IDABSR01025017
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethylamine_C1
Species
Start position on genome 10
End posion on genome 86
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nttctgtctt
tRNA gene sequence 
CGGCGTGTAGCGTAGCCTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGGGAGTTCGAA
TCTCTCCACGCCGACCA
Downstream region at tRNA end position 
aattttttac
Secondary structure (Cloverleaf model)
>ENV09001533	Pro	TGG
                   t      ACCA aattttttac
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    C       T G C G       G G G A G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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