The detailed information of tRNA gene sequence


Sequence ID>ENV09001543
Genome IDABSR01027042
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethylamine_C1
Species
Start position on genome 483
End posion on genome 395
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgccaatttt
tRNA gene sequence 
GGATGAGTGGCTGAGCACGGTTTAAGGCGCTCGCCTTGAGAGCGAGAGTAGCATAGCTAC
CGGGGGTTCAAATCCCTCCTCATCCTCCA
Downstream region at tRNA end position 
tattttcggt
Secondary structure (Cloverleaf model)
>ENV09001543	Ser	TGA
                   t      TCCA tattttcggt
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
    A C G A        G      | + | | |     A
  C         G T C G       G G G G G     C
  G           + | |                 T T
  G         A G G C
    T T T A        G     AGTAGCATAGCTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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