The detailed information of tRNA gene sequence


Sequence ID>ENV09001548
Genome IDABSR01027353
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethylamine_C1
Species
Start position on genome 659
End posion on genome 731
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctggtagttt
tRNA gene sequence 
cGGGGGAATGGTTCAACGGCTAGAATTCTAGGCTTCAAACTTAGAGATGGGGGTTCGATT
CCCTCTTCCCCTGCata
Downstream region at tRNA end position 
aagtcaaaag
Secondary structure (Cloverleaf model)
>ENV09001548	SeC	TCA
                   t      Cata aagtcaaaag
                     c - G
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T T
                    T     C T C C C     A
      C A A        G      | + | | |     G
    G       C T T G       G G G G G     C
    G       | | | +                 T T
    C       G A A T
      T A          T     AGAT
                    C - G
                    T - A
                    A - T
                    G + T
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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