The detailed information of tRNA gene sequence


Sequence ID>ENV09001554
Genome IDABSR01028362
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethylamine_C1
Species
Start position on genome 291
End posion on genome 378
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgtaactttc
tRNA gene sequence 
GGAGAGGTGCAGGAGCGGTTGAACTGGCCACCCTGGAAAGGTGGTATACCGGCAACGGTA
TCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
aagagaccag
Secondary structure (Cloverleaf model)
>ENV09001554	Ser	GGA
                   c      GCtg aagagaccag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G A C       G T G G G     C
    G         | | |                 T T
    T       A C T G
      T G A        G     TATACCGGCAACGGTATC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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