The detailed information of tRNA gene sequence


Sequence ID>ENV09001611
Genome IDABVN01005702
Search identical group
Phylum/ClassMarine metagenome gcontig_contig00001
Species
Start position on genome 4
End posion on genome 91
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnncat
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTTATGGCTCTGGTCTTGAAAACCAGCGTGTCTGCAAGGGCA
CCGTCGGTTCGAATCCGACCCTCTCCGCtc
Downstream region at tRNA end position 
aataagcaag
Secondary structure (Cloverleaf model)
>ENV09001611	Ser	TGA
                   t      GCtc aataagcaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A G C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T C G G     C
    G       + | + |                 T T
    T       T G G C
      T T A        T     CGTGTCTGCAAGGGCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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