The detailed information of tRNA gene sequence


Sequence ID>ENV09001643
Genome IDACQI01000216
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 661
End posion on genome 734
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaacgttatt
tRNA gene sequence 
GGTGGAATAGCAAAGTGGCTATGCAGTGGATTGCAAATCCATCTACCTCGGTTCGACTCC
GGGTTCCACCTCCA
Downstream region at tRNA end position 
ttttcgtaat
Secondary structure (Cloverleaf model)
>ENV09001643	Cys	GCA
                   t      TCCA ttttcgtaat
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     A - T          T C
                    T     G G G C C     A
        G A        A      | + | | |     G
      T     A A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        C T        A     CTAC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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