The detailed information of tRNA gene sequence


Sequence ID>ENV09001665
Genome IDACQI01001629
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 1230
End posion on genome 1306
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gaacggatat
tRNA gene sequence 
GGGTGATTAGCTCAGCTGGTCAGAGCATCTCGTTTACACCGAGAGGGTCGGGAGTTCGAA
TCTCTCATCACCCACCA
Downstream region at tRNA end position 
ttccaagggc
Secondary structure (Cloverleaf model)
>ENV09001665	Val	TAC
                   t      ACCA ttccaagggc
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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