The detailed information of tRNA gene sequence


Sequence ID>ENV09001668
Genome IDACQI01001666
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 942
End posion on genome 867
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
acctattttg
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCAACACTGGCAGTGTTGAGGTCTGCGGTTCGATC
CCGCATAGCTCCACCA
Downstream region at tRNA end position 
attattttat
Secondary structure (Cloverleaf model)
>ENV09001668	Ala	GGC
                   g      ACCA attattttat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     A C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       T G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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