The detailed information of tRNA gene sequence


Sequence ID>ENV09001677
Genome IDACQI01001919
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 482
End posion on genome 572
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttccatagc
tRNA gene sequence 
GGAGAGCTGTCTGAGTGGTTGAAGGAGCTCGCCTGGAAAGTGAGTATAGGTTAATCGCCT
ATCGGGGGTTCGAATCCCCCGCTCTCCGCCA
Downstream region at tRNA end position 
tgcgggtatc
Secondary structure (Cloverleaf model)
>ENV09001677	Ser	GGA
                   c      GCCA tgcgggtatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G G G G G     C
    G         + | |                 T T
    T       A G G A
      T G A        G     TATAGGTTAATCGCCTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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