The detailed information of tRNA gene sequence


Sequence ID>ENV09001680
Genome IDACQI01002070
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 316
End posion on genome 242
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cgtcgtatta
tRNA gene sequence 
GGCCCTGTCGTCTAACGGTTAGGACGCCAGGTTTTCAACCTGGTAATCGGGGTTCGATTC
CCCGTGGGGTCACCA
Downstream region at tRNA end position 
aaacctggct
Secondary structure (Cloverleaf model)
>ENV09001680	Glu	TTC
                   a      ACCA aaacctggct
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T + G
                     G + T          T T
                    T     G C C C C     A
      C A A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     TAAT
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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