The detailed information of tRNA gene sequence


Sequence ID>ENV09001682
Genome IDACQI01002148
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 6414
End posion on genome 6338
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccaagtaatt
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCAAA
TCCACCCAGACCCACCA
Downstream region at tRNA end position 
aattttccgc
Secondary structure (Cloverleaf model)
>ENV09001682	Ile	GAT
                   t      ACCA aattttccgc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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