The detailed information of tRNA gene sequence


Sequence ID>ENV09001691
Genome IDACQI01002700
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 688
End posion on genome 612
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
acatcacaat
tRNA gene sequence 
CGGAGTGTAGCGCAGCCTGGTAGCGTAGCGGTCTGGGGGACCGTTGGTCGTCGGTTCAAA
TCCGGCCACTCCGACCA
Downstream region at tRNA end position 
ttttattttt
Secondary structure (Cloverleaf model)
>ENV09001691	Pro	GGG
                   t      ACCA ttttattttt
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | + | | |     A
    C       C G C G       G T C G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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