The detailed information of tRNA gene sequence


Sequence ID>ENV09001692
Genome IDACQI01002765
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 859
End posion on genome 783
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcataatcgt
tRNA gene sequence 
GTCAAGGTAGCTCAGCTGGTTAGAGCGCTGGTCTCATAAGCCGGAGGTCGAGGGTTCGAG
TCCCTCTCTTGACACCA
Downstream region at tRNA end position 
ttttcttttt
Secondary structure (Cloverleaf model)
>ENV09001692	Met	CAT
                   t      ACCA ttttcttttt
                     G - C
                     T - A
                     C - G
                     A - T
                     A - T
                     G - C
                     G + T          T G
                    T     C T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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