The detailed information of tRNA gene sequence


Sequence ID>ENV09001701
Genome IDACQI01003048
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 872
End posion on genome 948
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gccctcgtgt
tRNA gene sequence 
GCCGGCGTAGCTCAGTAGGTTAGAGCGCTTGATTGTGGATCAAGAGGCCCCCCGTTCGAG
CCGGGGCGCTGGTACCA
Downstream region at tRNA end position 
ccctttatca
Secondary structure (Cloverleaf model)
>ENV09001701	His	GTG
                   t      ACCA ccctttatca
                     G + T
                     C - G
                     C - G
                     G + T
                     G - C
                     C - G
                     G - C          C G
                    T     G G G G C     A
      T G A        A      | | | | |     G
    A       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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