The detailed information of tRNA gene sequence


Sequence ID>ENV09001703
Genome IDACQI01003160
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 616
End posion on genome 694
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cactaaaaat
tRNA gene sequence 
GGAGCCGTAGTTCAGCCTGGCCCAGAACGCTGGCCTGTCACGCCAGAGGTCGCGGGTTCG
AATCCCGTCGGCTCCGCCA
Downstream region at tRNA end position 
tttatttatc
Secondary structure (Cloverleaf model)
>ENV09001703	Asp	GTC
                   t      GCCA tttatttatc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
    C C G A        A      + | | | |     G
  T         C T T G       G C G G G     C
  G         | | | |                 T T
  G         G A A C
    C C C A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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