The detailed information of tRNA gene sequence


Sequence ID>ENV09001717
Genome IDACQI01003520
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 118
End posion on genome 194
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cacccaccat
tRNA gene sequence 
GGAGCGGTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAA
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
gaatttttaa
Secondary structure (Cloverleaf model)
>ENV09001717	Asp	GTC
                   t      GCCA gaatttttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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