The detailed information of tRNA gene sequence


Sequence ID>ENV09001727
Genome IDACQI01003833
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 703
End posion on genome 628
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgaggaaaa
tRNA gene sequence 
GGGCCCATAGCTCAACGGTCAGAGCAACCGGCTCATAACCGGCTGGTTCTAGGTTCGAAT
CCTAGTGGGCCCACCA
Downstream region at tRNA end position 
gaacagatgt
Secondary structure (Cloverleaf model)
>ENV09001727	Met	CAT
                   a      ACCA gaacagatgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G A T C C     A
      C A A        A      | | | | |     G
    G       C T C G       C T A G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     TGGTT
                    A   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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