The detailed information of tRNA gene sequence


Sequence ID>ENV09001731
Genome IDACQI01003953
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 361
End posion on genome 437
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcagaataa
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTTAGAGCACTCGACTCATAATCGATAGGTCCACAGTTCAAG
TCTGTGAGGGCCCACCA
Downstream region at tRNA end position 
tcttgttaaa
Secondary structure (Cloverleaf model)
>ENV09001731	Met	CAT
                   a      ACCA tcttgttaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G T G T C     A
      T G A        A      | | | | |     A
    T       C T C G       C A C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C   T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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