The detailed information of tRNA gene sequence


Sequence ID>ENV09001742
Genome IDACQI01004504
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 536
End posion on genome 450
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taccattttT
tRNA gene sequence 
GGCGAGATAGCCAAGCCCGGTATGGCGTAGGATTGCTAATCCTATGGTGCTTTGCACCTC
GGGGGTTCGAATCCCCCTCTCGTCGTtc
Downstream region at tRNA end position 
ttttttgata
Secondary structure (Cloverleaf model)
>ENV09001742	Ser	GCT
                   T      GTtc ttttttgata
                     G - C
                     G + T
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     G
    C       A C C G       G G G G G     C
    C       | | | |                 T T
    G       T G G C
      G T A        G     TGGTGCTTTGCACCTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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