The detailed information of tRNA gene sequence


Sequence ID>ENV09001744
Genome IDACQI01004650
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 1101
End posion on genome 1027
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cccgcctcac
tRNA gene sequence 
GGGTGATTAGCTCAGTGGTAGAGCGCTTCGTTCACATCGAAGATGTCAGAAGTTCGAATC
TTCTATCACCCACCA
Downstream region at tRNA end position 
ttttctccgg
Secondary structure (Cloverleaf model)
>ENV09001744	Val	CAC
                   c      ACCA ttttctccgg
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T C T T C     A
        G A        A      | | | | |     G
      T     C T C G       A G A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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