The detailed information of tRNA gene sequence


Sequence ID>ENV09001758
Genome IDACQI01005255
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 1118
End posion on genome 1190
Amino Acid Pseudo
Anticodon GCG
Upstream region at tRNA start position 
aactttttct
tRNA gene sequence 
GTCCTGGTAGGGTAGTGGATATCCTTGGGGCTTGCGGAGCCTTAGACTCGAGTTCGAATC
TTGGCCAGGACGCtt
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>ENV09001758	Pseudo	GCG
                   t      GCtt tttttatttt
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G T T C     A
      T G A        A      + | + | |     G
    G       T G G G       T C G A G     C
    G         | | +                 T T
    A       T C C T
      T A          T     AGAC
                    G + T
                    G + T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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