The detailed information of tRNA gene sequence


Sequence ID>ENV09001786
Genome IDACQI01006024
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 2304
End posion on genome 2214
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaaacaaat
tRNA gene sequence 
GGATAGGTGGGTGAGTTGGCTGAAACCACATCCCTGCTAAGGATGCGTACTGGTAACGGT
ACCGAGGGTTCGAATCCCTCCCTATCCGCCA
Downstream region at tRNA end position 
tactgcatta
Secondary structure (Cloverleaf model)
>ENV09001786	Ser	GCT
                   t      GCCA tactgcatta
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  C         A A C C
    T G A          A     CGTACTGGTAACGGTACC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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