The detailed information of tRNA gene sequence


Sequence ID>ENV09001788
Genome IDACQI01006104
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 4254
End posion on genome 4340
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ccgctccaat
tRNA gene sequence 
GCCCAGGTGGTGAAATTGGTAGACACAAGGGACTTAAAATCCCTCGGCTTAACGGCCGTG
CCGGTTCGATTCCGGCCCTGGGCACCA
Downstream region at tRNA end position 
tatttctagt
Secondary structure (Cloverleaf model)
>ENV09001788	Leu	TAA
                   t      ACCA tatttctagt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       A G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGGCTTAACGGCCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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