The detailed information of tRNA gene sequence


Sequence ID>ENV09001789
Genome IDACQI01006113
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 539
End posion on genome 463
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcaaaatta
tRNA gene sequence 
GCCCCCTTAGCTCAGTTGGTTAGAGCACCCGACTCATAATCGGTAGGTCCCCTGTTCGAG
TCAGGGAGGGGGCACCA
Downstream region at tRNA end position 
aattttaaag
Secondary structure (Cloverleaf model)
>ENV09001789	Met	CAT
                   a      ACCA aattttaaag
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G G G A C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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