The detailed information of tRNA gene sequence


Sequence ID>ENV09001792
Genome IDACQI01006540
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 494
End posion on genome 405
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgaaccaac
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAGACCGTC
TCCAGGGTTCGAATCCCTGTCTGTCCGCCA
Downstream region at tRNA end position 
gccaccactt
Secondary structure (Cloverleaf model)
>ENV09001792	Ser	GGA
                   c      GCCA gccaccactt
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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