The detailed information of tRNA gene sequence


Sequence ID>ENV09001797
Genome IDACQI01007892
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 140
End posion on genome 65
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cccaattaat
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCCTCGCTGGCAGCGAGGAGGTCAGGAGTTCGATC
CTCCTAGGCTCCACCA
Downstream region at tRNA end position 
atttcctttc
Secondary structure (Cloverleaf model)
>ENV09001797	Ala	GGC
                   t      ACCA atttcctttc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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