The detailed information of tRNA gene sequence


Sequence ID>ENV09001827
Genome IDACQI01012112
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 48
End posion on genome 124
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgttcagcgg
tRNA gene sequence 
GCGGTTGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCAACCGCGCCA
Downstream region at tRNA end position 
ccgctgaaac
Secondary structure (Cloverleaf model)
>ENV09001827	Asp	GTC
                   g      GCCA ccgctgaaac
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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