The detailed information of tRNA gene sequence


Sequence ID>ENV09001838
Genome IDACQI01014118
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 287
End posion on genome 201
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taggagttat
tRNA gene sequence 
GGAGAGATCGAATAATGGTATTTCAGCGGCTTGCTAAGCCGTCGCGGGTTAAACCGCTTG
TGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aattgcactt
Secondary structure (Cloverleaf model)
>ENV09001838	Ser	GCT
                   t      GCCA aattgcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
        A A        C      | | | | |     G
      T     T A A G       G T G G G     C
      G       | | |                 T T
      G     T T T C
        T A        A     CGCGGGTTAAACCGCTT
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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