The detailed information of tRNA gene sequence


Sequence ID>ENV09001848
Genome IDACQI01016120
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 339
End posion on genome 267
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attcttataa
tRNA gene sequence 
GGGGCTGTAGTATAATCTGGCAGAATGGCTGGCTCCAGACCAGCAGATCAGGGTTCAAAT
CCTTGCGGCCTCAttt
Downstream region at tRNA end position 
cattctttac
Secondary structure (Cloverleaf model)
>ENV09001848	Trp	CCA
                   a      Attt cattctttac
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     G T T C C     A
      T A A        A      | | + | |     A
    C       T A T G       C A G G G     C
    T       +   | +                 T T
    G       G A A T
      G C A        G     AGAT
                    G - C
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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