The detailed information of tRNA gene sequence


Sequence ID>ENV09001859
Genome IDACQI01017224
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 161
End posion on genome 250
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctttcccat
tRNA gene sequence 
GGATAGCTGGCTGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTTTAGGTTTATCCCTA
ACAAGAGTTCGAATCTCTTGCTATCCGCCA
Downstream region at tRNA end position 
tattgaaaaa
Secondary structure (Cloverleaf model)
>ENV09001859	Ser	GGA
                   t      GCCA tattgaaaaa
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     C - G          T A
                    T     T T C T C     A
      T G A        G      | | | | |     G
    G       G T C G       A A G A G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TTTAGGTTTATCCCTAAC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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