The detailed information of tRNA gene sequence


Sequence ID>ENV09001863
Genome IDACQI01017586
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 517
End posion on genome 592
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atccgaaaat
tRNA gene sequence 
GGAGCTATAGCAAAGTTGGTAATGCCCGGGATTGCAAATCCTGTATGCGTCGGTTCGAGT
CCGGCTAGCTCCTCCA
Downstream region at tRNA end position 
cttacttttt
Secondary structure (Cloverleaf model)
>ENV09001863	Cys	GCA
                   t      TCCA cttacttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     C G G C C     A
      T G A        A      | + | | |     G
    T       A A C G       G T C G G     C
    G         | | |                 T T
    G       A T G C
      T A          C     TATGC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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