The detailed information of tRNA gene sequence


Sequence ID>ENV09001864
Genome IDACQI01017658
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 114
End posion on genome 187
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tcctaaatat
tRNA gene sequence 
GCCTCGGTGGCTCAGCCTGGCAGAGCGAGTGATTTGTAATCACTAAGTCGCGAGTTCGAA
TCTCGCTCGGGGCTttt
Downstream region at tRNA end position 
ttttatttat
Secondary structure (Cloverleaf model)
>ENV09001864	Thr	TGT
                   t      Tttt ttttatttat
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G + T          T A
                    T     C G C T C     A
      C G A        G      | | | | |     G
    C       C T C G       G C G A G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AAGTC
                    A - T
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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