The detailed information of tRNA gene sequence


Sequence ID>ENV09001872
Genome IDACQI01019306
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 590
End posion on genome 674
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ctttaaaatt
tRNA gene sequence 
GCCTTGGTGGCGGAATTGGTAGACGCGTTGGATTCAAAATCCAATTCTTTCGAGAGTGTG
GGTTCGATTCCCACCCAAGGTACAA
Downstream region at tRNA end position 
acaacacaac
Secondary structure (Cloverleaf model)
>ENV09001872	Leu	CAA
                   t      ACAA acaacacaac
                     G + T
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C
                     G - C          T T
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCTTTCGAGAGT
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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