The detailed information of tRNA gene sequence


Sequence ID>ENV09001887
Genome IDACQI01022004
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 191
End posion on genome 118
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aggggttttc
tRNA gene sequence 
GTTCCCATAGTTTAGTGGAAGAACAACTCCCTCCTAAGGAGTAGACCTCAGTTCGATTCT
GAGTGGGGATACCA
Downstream region at tRNA end position 
aattcaaaat
Secondary structure (Cloverleaf model)
>ENV09001887	Arg	CCT
                   c      ACCA aattcaaaat
                     G + T
                     T - A
                     T + G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G A G T C     A
        G A        A      | | | | |     G
      T     T T T G       C T C A G     C
      G     + | | |                 T T
      G     G A A C
        A A        A     AGAC
                    A - T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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