The detailed information of tRNA gene sequence


Sequence ID>ENV09001899
Genome IDACQI01023501
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 687
End posion on genome 611
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caactacagt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGAGCGCTCATAACGCTTTGGTCGCAGGTTCGAG
TCCTGCCGGGCCTACCA
Downstream region at tRNA end position 
ttaagctttt
Secondary structure (Cloverleaf model)
>ENV09001899	Met	CAT
                   t      ACCA ttaagctttt
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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