The detailed information of tRNA gene sequence


Sequence ID>ENV09001900
Genome IDACQI01023646
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 568
End posion on genome 476
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tattgtgtct
tRNA gene sequence 
GGTGACGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTTTATAGCC
TCATCGAGAGTTCGAATCTCTCCGTCACCGCCA
Downstream region at tRNA end position 
ttttcctaat
Secondary structure (Cloverleaf model)
>ENV09001900	Ser	GCT
                   t      GCCA ttttcctaat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGTTTATAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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