The detailed information of tRNA gene sequence


Sequence ID>ENV09001905
Genome IDACQI01024376
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 225
End posion on genome 149
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aattttcctt
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAGGAGTTCGAC
TCTCCTATTCTCCACCA
Downstream region at tRNA end position 
tttattttaa
Secondary structure (Cloverleaf model)
>ENV09001905	Ala	TGC
                   t      ACCA tttattttaa
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T C
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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